Magic Bubbles is a bubble-popping puzzle game with a magical fantasy theme. The player travels a winding path marked with numbered buttons, level by level, through the sky among the clouds. They must clear the sky of hanging patterns of ball-style bubbles or bubble balls. They use various types of shooting strategies, a ring shooter that features two swappable projectors, a laser aiming line, and boosters to knock the bubbles away from each pattern in clusters of three or more matching ones. They earn coins, points and stars for every success.�
The game offers the player challenges with each task. They might need to clear every bubble from the field or merely a specific type. They might also need to perform a task within a specific number of moves.
The player can track the number of shots remaining at the center of the ring. Other challenges include obstacles such as chained, cloud-covered and unpoppable boulder bubbles. The game also rewards the player with additional coins and boosters when they reach certain milestones, such as popping a specific number of one-colored bubbles or reaching specific levels.
Magic Bubbles gives the player useful booster tools when they reach different levels, such as bomb, rocket and laser bomb boosters. They can also open treasure chests after they earn enough stars.